UCSDI5 Sandbox - Local Development build (v0.0.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions
Official URL: http://hl7.org/fhir/us/core/StructureDefinition/us-core-specimen | Version: 0.0.0 | |||
Standards status: Trial-use | Maturity Level: 0 | Computable Name: USCoreSpecimenProfile | ||
Copyright/Legal: Used by permission of HL7 International, all rights reserved Creative Commons License |
The US Core Specimen Profile inherits from the FHIR Specimen resource; refer to it for scope and usage definitions. This profile sets minimum expectations for the Specimen resource to record, search, and fetch information about substances associated with a patient being sampled or tested (such as nasopharyngeal swab, whole blood, or serum). It specifies which core elements, extensions, vocabularies, and value sets SHALL be present and constrains how the elements are used. Providing the floor for standards development for specific use cases promotes interoperability and adoption.
Usage:
Description of Profiles, Differentials, Snapshots and how the different presentations work.
This structure is derived from Specimen
Name | Flags | Card. | Type | Description & Constraints |
---|---|---|---|---|
Specimen | 0..* | Specimen | Sample for analysis | |
identifier | S | 0..* | Identifier | Specimen identifier |
accessionIdentifier | S | 0..1 | Identifier | Identifier assigned by the lab |
type | S | 1..1 | CodeableConcept | Kind of material that forms the specimen Binding: Specimen type (extensible) |
subject | S | 0..1 | Reference(US Core Patient Profile(7.0.0) S | Group | Device | Substance | US Core Location Profile(7.0.0)) | The patient where the specimen came from. |
collection | 0..1 | BackboneElement | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Collection details | |
bodySite | 0..1 | CodeableConcept | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Specimen Source Site Binding: SNOMEDCTBodyStructures (extensible) | |
condition | 0..* | CodeableConcept | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Specimen condition Binding: US Core Specimen Condition (extensible) | |
Documentation for this format |
Path | Conformance | ValueSet | URI |
Specimen.type | extensible | SpecimenType http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1099.54 | |
Specimen.collection.bodySite | extensible | SNOMEDCTBodyStructureshttp://hl7.org/fhir/ValueSet/body-site from the FHIR Standard | |
Specimen.condition | extensible | USCoreSpecimenConditionhttp://hl7.org/fhir/us/core/ValueSet/us-core-specimen-condition from this IG |
Name | Flags | Card. | Type | Description & Constraints |
---|---|---|---|---|
Specimen | 0..* | Specimen | Sample for analysis | |
implicitRules | ?!Σ | 0..1 | uri | A set of rules under which this content was created |
modifierExtension | ?! | 0..* | Extension | Extensions that cannot be ignored |
identifier | SΣ | 0..* | Identifier | Specimen identifier |
accessionIdentifier | SΣ | 0..1 | Identifier | Identifier assigned by the lab |
status | ?!Σ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen. |
type | SΣ | 1..1 | CodeableConcept | Kind of material that forms the specimen Binding: Specimen type (extensible) |
subject | SΣ | 0..1 | Reference(US Core Patient Profile(7.0.0)) | The patient where the specimen came from. |
collection | 0..1 | BackboneElement | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Collection details | |
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized |
bodySite | 0..1 | CodeableConcept | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Specimen Source Site Binding: SNOMEDCTBodyStructures (extensible) | |
condition | Σ | 0..* | CodeableConcept | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Specimen condition Binding: US Core Specimen Condition (extensible) |
Documentation for this format |
Path | Conformance | ValueSet | URI |
Specimen.status | required | SpecimenStatushttp://hl7.org/fhir/ValueSet/specimen-status|4.0.1 from the FHIR Standard | |
Specimen.type | extensible | SpecimenType http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1099.54 | |
Specimen.collection.bodySite | extensible | SNOMEDCTBodyStructureshttp://hl7.org/fhir/ValueSet/body-site from the FHIR Standard | |
Specimen.condition | extensible | USCoreSpecimenConditionhttp://hl7.org/fhir/us/core/ValueSet/us-core-specimen-condition from this IG |
Id | Grade | Path(s) | Details | Requirements |
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty() | |
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty() | |
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty() | |
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty() | |
dom-6 | best practice | Specimen | A resource should have narrative for robust management : text.`div`.exists() | |
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count()) | |
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both : extension.exists() != value.exists() |
Name | Flags | Card. | Type | Description & Constraints | ||||
---|---|---|---|---|---|---|---|---|
Specimen | 0..* | Specimen | Sample for analysis | |||||
id | Σ | 0..1 | id | Logical id of this artifact | ||||
meta | Σ | 0..1 | Meta | Metadata about the resource | ||||
implicitRules | ?!Σ | 0..1 | uri | A set of rules under which this content was created | ||||
language | 0..1 | code | Language of the resource content Binding: CommonLanguages (preferred): A human language.
| |||||
text | 0..1 | Narrative | Text summary of the resource, for human interpretation | |||||
contained | 0..* | Resource | Contained, inline Resources | |||||
extension | 0..* | Extension | Additional content defined by implementations | |||||
modifierExtension | ?! | 0..* | Extension | Extensions that cannot be ignored | ||||
identifier | SΣ | 0..* | Identifier | Specimen identifier | ||||
accessionIdentifier | SΣ | 0..1 | Identifier | Identifier assigned by the lab | ||||
status | ?!Σ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen. | ||||
type | SΣ | 1..1 | CodeableConcept | Kind of material that forms the specimen Binding: Specimen type (extensible) | ||||
subject | SΣ | 0..1 | Reference(US Core Patient Profile(7.0.0) S | Group | Device | Substance | US Core Location Profile(7.0.0)) | The patient where the specimen came from. | ||||
receivedTime | Σ | 0..1 | dateTime | The time when specimen was received for processing | ||||
parent | 0..* | Reference(Specimen) | Specimen from which this specimen originated | |||||
request | 0..* | Reference(ServiceRequest) | Why the specimen was collected | |||||
collection | 0..1 | BackboneElement | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Collection details | |||||
id | 0..1 | string | Unique id for inter-element referencing | |||||
extension | 0..* | Extension | Additional content defined by implementations | |||||
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ||||
collector | Σ | 0..1 | Reference(Practitioner | PractitionerRole) | Who collected the specimen | ||||
collected[x] | Σ | 0..1 | Collection time | |||||
collectedDateTime | dateTime | |||||||
collectedPeriod | Period | |||||||
duration | Σ | 0..1 | Duration | How long it took to collect specimen | ||||
quantity | 0..1 | SimpleQuantity | The quantity of specimen collected | |||||
method | 0..1 | CodeableConcept | Technique used to perform collection Binding: FHIRSpecimenCollectionMethod (example): The technique that is used to perform the procedure. | |||||
bodySite | 0..1 | CodeableConcept | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Specimen Source Site Binding: SNOMEDCTBodyStructures (extensible) | |||||
fastingStatus[x] | Σ | 0..1 | Whether or how long patient abstained from food and/or drink Binding: hl7VS-relevantClincialInformation (extensible): Codes describing the fasting status of the patient. | |||||
fastingStatusCodeableConcept | CodeableConcept | |||||||
fastingStatusDuration | Duration | |||||||
processing | 0..* | BackboneElement | Processing and processing step details | |||||
id | 0..1 | string | Unique id for inter-element referencing | |||||
extension | 0..* | Extension | Additional content defined by implementations | |||||
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ||||
description | 0..1 | string | Textual description of procedure | |||||
procedure | 0..1 | CodeableConcept | Indicates the treatment step applied to the specimen Binding: SpecimenProcessingProcedure (example): Type indicating the technique used to process the specimen. | |||||
additive | 0..* | Reference(Substance) | Material used in the processing step | |||||
time[x] | 0..1 | Date and time of specimen processing | ||||||
timeDateTime | dateTime | |||||||
timePeriod | Period | |||||||
container | 0..* | BackboneElement | Direct container of specimen (tube/slide, etc.) | |||||
id | 0..1 | string | Unique id for inter-element referencing | |||||
extension | 0..* | Extension | Additional content defined by implementations | |||||
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ||||
identifier | Σ | 0..* | Identifier | Id for the container | ||||
description | 0..1 | string | Textual description of the container | |||||
type | 0..1 | CodeableConcept | Kind of container directly associated with specimen Binding: SpecimenContainerType (example): Type of specimen container. | |||||
capacity | 0..1 | SimpleQuantity | Container volume or size | |||||
specimenQuantity | 0..1 | SimpleQuantity | Quantity of specimen within container | |||||
additive[x] | 0..1 | Additive associated with container Binding: hl7VS-additivePreservative (example): Substance added to specimen container. | ||||||
additiveCodeableConcept | CodeableConcept | |||||||
additiveReference | Reference(Substance) | |||||||
condition | Σ | 0..* | CodeableConcept | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Specimen condition Binding: US Core Specimen Condition (extensible) | ||||
note | 0..* | Annotation | Comments | |||||
Documentation for this format |
Path | Conformance | ValueSet | URI | |||
Specimen.language | preferred | CommonLanguages
http://hl7.org/fhir/ValueSet/languages from the FHIR Standard | ||||
Specimen.status | required | SpecimenStatushttp://hl7.org/fhir/ValueSet/specimen-status|4.0.1 from the FHIR Standard | ||||
Specimen.type | extensible | SpecimenType http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1099.54 | ||||
Specimen.collection.method | example | FHIRSpecimenCollectionMethodhttp://hl7.org/fhir/ValueSet/specimen-collection-method from the FHIR Standard | ||||
Specimen.collection.bodySite | extensible | SNOMEDCTBodyStructureshttp://hl7.org/fhir/ValueSet/body-site from the FHIR Standard | ||||
Specimen.collection.fastingStatus[x] | extensible | Hl7VSRelevantClincialInformationhttp://terminology.hl7.org/ValueSet/v2-0916 | ||||
Specimen.processing.procedure | example | SpecimenProcessingProcedurehttp://hl7.org/fhir/ValueSet/specimen-processing-procedure from the FHIR Standard | ||||
Specimen.container.type | example | SpecimenContainerTypehttp://hl7.org/fhir/ValueSet/specimen-container-type from the FHIR Standard | ||||
Specimen.container.additive[x] | example | Hl7VSAdditivePreservativehttp://terminology.hl7.org/ValueSet/v2-0371 | ||||
Specimen.condition | extensible | USCoreSpecimenConditionhttp://hl7.org/fhir/us/core/ValueSet/us-core-specimen-condition from this IG |
Id | Grade | Path(s) | Details | Requirements |
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty() | |
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty() | |
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty() | |
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty() | |
dom-6 | best practice | Specimen | A resource should have narrative for robust management : text.`div`.exists() | |
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count()) | |
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both : extension.exists() != value.exists() |
This structure is derived from Specimen
Summary
Mandatory: 1 element
Must-Support: 4 elements
Structures
This structure refers to these other structures:
Maturity: 0
Differential View
This structure is derived from Specimen
Name | Flags | Card. | Type | Description & Constraints |
---|---|---|---|---|
Specimen | 0..* | Specimen | Sample for analysis | |
identifier | S | 0..* | Identifier | Specimen identifier |
accessionIdentifier | S | 0..1 | Identifier | Identifier assigned by the lab |
type | S | 1..1 | CodeableConcept | Kind of material that forms the specimen Binding: Specimen type (extensible) |
subject | S | 0..1 | Reference(US Core Patient Profile(7.0.0) S | Group | Device | Substance | US Core Location Profile(7.0.0)) | The patient where the specimen came from. |
collection | 0..1 | BackboneElement | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Collection details | |
bodySite | 0..1 | CodeableConcept | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Specimen Source Site Binding: SNOMEDCTBodyStructures (extensible) | |
condition | 0..* | CodeableConcept | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Specimen condition Binding: US Core Specimen Condition (extensible) | |
Documentation for this format |
Path | Conformance | ValueSet | URI |
Specimen.type | extensible | SpecimenType http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1099.54 | |
Specimen.collection.bodySite | extensible | SNOMEDCTBodyStructureshttp://hl7.org/fhir/ValueSet/body-site from the FHIR Standard | |
Specimen.condition | extensible | USCoreSpecimenConditionhttp://hl7.org/fhir/us/core/ValueSet/us-core-specimen-condition from this IG |
Key Elements View
Name | Flags | Card. | Type | Description & Constraints |
---|---|---|---|---|
Specimen | 0..* | Specimen | Sample for analysis | |
implicitRules | ?!Σ | 0..1 | uri | A set of rules under which this content was created |
modifierExtension | ?! | 0..* | Extension | Extensions that cannot be ignored |
identifier | SΣ | 0..* | Identifier | Specimen identifier |
accessionIdentifier | SΣ | 0..1 | Identifier | Identifier assigned by the lab |
status | ?!Σ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen. |
type | SΣ | 1..1 | CodeableConcept | Kind of material that forms the specimen Binding: Specimen type (extensible) |
subject | SΣ | 0..1 | Reference(US Core Patient Profile(7.0.0)) | The patient where the specimen came from. |
collection | 0..1 | BackboneElement | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Collection details | |
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized |
bodySite | 0..1 | CodeableConcept | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Specimen Source Site Binding: SNOMEDCTBodyStructures (extensible) | |
condition | Σ | 0..* | CodeableConcept | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Specimen condition Binding: US Core Specimen Condition (extensible) |
Documentation for this format |
Path | Conformance | ValueSet | URI |
Specimen.status | required | SpecimenStatushttp://hl7.org/fhir/ValueSet/specimen-status|4.0.1 from the FHIR Standard | |
Specimen.type | extensible | SpecimenType http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1099.54 | |
Specimen.collection.bodySite | extensible | SNOMEDCTBodyStructureshttp://hl7.org/fhir/ValueSet/body-site from the FHIR Standard | |
Specimen.condition | extensible | USCoreSpecimenConditionhttp://hl7.org/fhir/us/core/ValueSet/us-core-specimen-condition from this IG |
Id | Grade | Path(s) | Details | Requirements |
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty() | |
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty() | |
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty() | |
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty() | |
dom-6 | best practice | Specimen | A resource should have narrative for robust management : text.`div`.exists() | |
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count()) | |
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both : extension.exists() != value.exists() |
Snapshot View
Name | Flags | Card. | Type | Description & Constraints | ||||
---|---|---|---|---|---|---|---|---|
Specimen | 0..* | Specimen | Sample for analysis | |||||
id | Σ | 0..1 | id | Logical id of this artifact | ||||
meta | Σ | 0..1 | Meta | Metadata about the resource | ||||
implicitRules | ?!Σ | 0..1 | uri | A set of rules under which this content was created | ||||
language | 0..1 | code | Language of the resource content Binding: CommonLanguages (preferred): A human language.
| |||||
text | 0..1 | Narrative | Text summary of the resource, for human interpretation | |||||
contained | 0..* | Resource | Contained, inline Resources | |||||
extension | 0..* | Extension | Additional content defined by implementations | |||||
modifierExtension | ?! | 0..* | Extension | Extensions that cannot be ignored | ||||
identifier | SΣ | 0..* | Identifier | Specimen identifier | ||||
accessionIdentifier | SΣ | 0..1 | Identifier | Identifier assigned by the lab | ||||
status | ?!Σ | 0..1 | code | available | unavailable | unsatisfactory | entered-in-error Binding: SpecimenStatus (required): Codes providing the status/availability of a specimen. | ||||
type | SΣ | 1..1 | CodeableConcept | Kind of material that forms the specimen Binding: Specimen type (extensible) | ||||
subject | SΣ | 0..1 | Reference(US Core Patient Profile(7.0.0) S | Group | Device | Substance | US Core Location Profile(7.0.0)) | The patient where the specimen came from. | ||||
receivedTime | Σ | 0..1 | dateTime | The time when specimen was received for processing | ||||
parent | 0..* | Reference(Specimen) | Specimen from which this specimen originated | |||||
request | 0..* | Reference(ServiceRequest) | Why the specimen was collected | |||||
collection | 0..1 | BackboneElement | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Collection details | |||||
id | 0..1 | string | Unique id for inter-element referencing | |||||
extension | 0..* | Extension | Additional content defined by implementations | |||||
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ||||
collector | Σ | 0..1 | Reference(Practitioner | PractitionerRole) | Who collected the specimen | ||||
collected[x] | Σ | 0..1 | Collection time | |||||
collectedDateTime | dateTime | |||||||
collectedPeriod | Period | |||||||
duration | Σ | 0..1 | Duration | How long it took to collect specimen | ||||
quantity | 0..1 | SimpleQuantity | The quantity of specimen collected | |||||
method | 0..1 | CodeableConcept | Technique used to perform collection Binding: FHIRSpecimenCollectionMethod (example): The technique that is used to perform the procedure. | |||||
bodySite | 0..1 | CodeableConcept | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Specimen Source Site Binding: SNOMEDCTBodyStructures (extensible) | |||||
fastingStatus[x] | Σ | 0..1 | Whether or how long patient abstained from food and/or drink Binding: hl7VS-relevantClincialInformation (extensible): Codes describing the fasting status of the patient. | |||||
fastingStatusCodeableConcept | CodeableConcept | |||||||
fastingStatusDuration | Duration | |||||||
processing | 0..* | BackboneElement | Processing and processing step details | |||||
id | 0..1 | string | Unique id for inter-element referencing | |||||
extension | 0..* | Extension | Additional content defined by implementations | |||||
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ||||
description | 0..1 | string | Textual description of procedure | |||||
procedure | 0..1 | CodeableConcept | Indicates the treatment step applied to the specimen Binding: SpecimenProcessingProcedure (example): Type indicating the technique used to process the specimen. | |||||
additive | 0..* | Reference(Substance) | Material used in the processing step | |||||
time[x] | 0..1 | Date and time of specimen processing | ||||||
timeDateTime | dateTime | |||||||
timePeriod | Period | |||||||
container | 0..* | BackboneElement | Direct container of specimen (tube/slide, etc.) | |||||
id | 0..1 | string | Unique id for inter-element referencing | |||||
extension | 0..* | Extension | Additional content defined by implementations | |||||
modifierExtension | ?!Σ | 0..* | Extension | Extensions that cannot be ignored even if unrecognized | ||||
identifier | Σ | 0..* | Identifier | Id for the container | ||||
description | 0..1 | string | Textual description of the container | |||||
type | 0..1 | CodeableConcept | Kind of container directly associated with specimen Binding: SpecimenContainerType (example): Type of specimen container. | |||||
capacity | 0..1 | SimpleQuantity | Container volume or size | |||||
specimenQuantity | 0..1 | SimpleQuantity | Quantity of specimen within container | |||||
additive[x] | 0..1 | Additive associated with container Binding: hl7VS-additivePreservative (example): Substance added to specimen container. | ||||||
additiveCodeableConcept | CodeableConcept | |||||||
additiveReference | Reference(Substance) | |||||||
condition | Σ | 0..* | CodeableConcept | 𝗔𝗗𝗗𝗜𝗧𝗜𝗢𝗡𝗔𝗟 𝗨𝗦𝗖𝗗𝗜: Specimen condition Binding: US Core Specimen Condition (extensible) | ||||
note | 0..* | Annotation | Comments | |||||
Documentation for this format |
Path | Conformance | ValueSet | URI | |||
Specimen.language | preferred | CommonLanguages
http://hl7.org/fhir/ValueSet/languages from the FHIR Standard | ||||
Specimen.status | required | SpecimenStatushttp://hl7.org/fhir/ValueSet/specimen-status|4.0.1 from the FHIR Standard | ||||
Specimen.type | extensible | SpecimenType http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1099.54 | ||||
Specimen.collection.method | example | FHIRSpecimenCollectionMethodhttp://hl7.org/fhir/ValueSet/specimen-collection-method from the FHIR Standard | ||||
Specimen.collection.bodySite | extensible | SNOMEDCTBodyStructureshttp://hl7.org/fhir/ValueSet/body-site from the FHIR Standard | ||||
Specimen.collection.fastingStatus[x] | extensible | Hl7VSRelevantClincialInformationhttp://terminology.hl7.org/ValueSet/v2-0916 | ||||
Specimen.processing.procedure | example | SpecimenProcessingProcedurehttp://hl7.org/fhir/ValueSet/specimen-processing-procedure from the FHIR Standard | ||||
Specimen.container.type | example | SpecimenContainerTypehttp://hl7.org/fhir/ValueSet/specimen-container-type from the FHIR Standard | ||||
Specimen.container.additive[x] | example | Hl7VSAdditivePreservativehttp://terminology.hl7.org/ValueSet/v2-0371 | ||||
Specimen.condition | extensible | USCoreSpecimenConditionhttp://hl7.org/fhir/us/core/ValueSet/us-core-specimen-condition from this IG |
Id | Grade | Path(s) | Details | Requirements |
dom-2 | error | Specimen | If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty() | |
dom-3 | error | Specimen | If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty() | |
dom-4 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty() | |
dom-5 | error | Specimen | If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty() | |
dom-6 | best practice | Specimen | A resource should have narrative for robust management : text.`div`.exists() | |
ele-1 | error | **ALL** elements | All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count()) | |
ext-1 | error | **ALL** extensions | Must have either extensions or value[x], not both : extension.exists() != value.exists() |
This structure is derived from Specimen
Summary
Mandatory: 1 element
Must-Support: 4 elements
Structures
This structure refers to these other structures:
Maturity: 0
Other representations of profile: CSV, Excel, Schematron